Index

_

__call__() (pybool_ir.query.dsl.AtomicQueryObject method)

A

add_document() (pybool_ir.index.index.Indexer method) (pybool_ir.index.Indexer method) AdHocDecomposeRetrievalExperiment() (in module pybool_ir.experiments.decompose) AdHocExperiment() (in module pybool_ir.experiments.retrieval)

analyzed_query (pybool_ir.query.units.UnitAtom property) AND (class in pybool_ir.experiments.decompose) atomic_callback (pybool_ir.experiments.decompose.DecomposeRetrievalExperiment attribute) AtomicQueryObject (class in pybool_ir.query.dsl) AtomNode (class in pybool_ir.query.ast)

B

bulk_index() (pybool_ir.index.index.Indexer method) (pybool_ir.index.Indexer method) (pybool_ir.index.ir_datasets.IRDatasetsIndexer method)

C

children (pybool_ir.query.ast.OperatorNode attribute) close() (pybool_ir.util.ProgressFile method)

CochraneReview (class in pybool_ir.datasets.csur.parser) Collection (class in pybool_ir.experiments.collections)

D

DecomposeRetrievalExperiment (class in pybool_ir.experiments.decompose)

Document (class in pybool_ir.index.document) download_file() (in module pybool_ir.util)

F

field (pybool_ir.query.ast.AtomNode attribute) format() (pybool_ir.query.generic.parser.GenericQueryParser method) (pybool_ir.query.GenericQueryParser method) (pybool_ir.query.parser.QueryParser method) (pybool_ir.query.pubmed.parser.PubmedQueryParser method) (pybool_ir.query.PubmedQueryParser method)

from_dir() (pybool_ir.experiments.collections.Collection class method) from_file() (pybool_ir.experiments.collections.Topic class method) from_hit() (pybool_ir.index.pubmed.PubmedArticle static method) from_str() (pybool_ir.query.units.QueryAtom class method)

G

GenericQueryParser (class in pybool_ir.query) (class in pybool_ir.query.generic.parser)

GenericSearcher (class in pybool_ir.index.generic) go() (pybool_ir.experiments.retrieval.RetrievalExperiment method)

I

index (pybool_ir.experiments.retrieval.LuceneSearcher attribute) (pybool_ir.index.index.Indexer attribute) (pybool_ir.index.Indexer attribute)

Indexer (class in pybool_ir.index) (class in pybool_ir.index.index) indexer (pybool_ir.experiments.retrieval.LuceneSearcher attribute) IRDatasetsIndexer (class in pybool_ir.index.ir_datasets)

J

JsonldIndexer (class in pybool_ir.index.generic)

JsonlIndexer (class in pybool_ir.index.generic)

L

load_collection() (in module pybool_ir.experiments.collections)

load_collection_ir_datasets() (in module pybool_ir.experiments.collections) LuceneSearcher (class in pybool_ir.experiments.retrieval)

M

mapping (in module pybool_ir.query.pubmed.fields) module pybool_ir pybool_ir.cli pybool_ir.datasets pybool_ir.datasets.csur pybool_ir.datasets.csur.parser pybool_ir.datasets.pubmed pybool_ir.datasets.pubmed.baseline pybool_ir.datasets.pubmed.datautils pybool_ir.datasets.pubmed.mesh pybool_ir.datasets.pubmed.pmc pybool_ir.experiments pybool_ir.experiments.collections pybool_ir.experiments.decompose pybool_ir.experiments.retrieval pybool_ir.experiments.smooth pybool_ir.index pybool_ir.index.document pybool_ir.index.generic pybool_ir.index.index pybool_ir.index.ir_datasets pybool_ir.index.pubmed pybool_ir.ml pybool_ir.query pybool_ir.query.ast pybool_ir.query.dsl pybool_ir.query.generic pybool_ir.query.generic.parser pybool_ir.query.ovid pybool_ir.query.parser pybool_ir.query.pubmed pybool_ir.query.pubmed.fields pybool_ir.query.pubmed.parser pybool_ir.query.units pybool_ir.util

N

NOT (class in pybool_ir.experiments.decompose)

O

Op (class in pybool_ir.query.dsl) Operator (class in pybool_ir.experiments.decompose) operator (pybool_ir.query.ast.OperatorNode attribute)

OperatorNode (class in pybool_ir.query.ast) operators (pybool_ir.experiments.decompose.DecomposeRetrievalExperiment attribute) OR (class in pybool_ir.experiments.decompose) OracleQueryExperiment (class in pybool_ir.experiments.smooth)

P

parse_ast() (pybool_ir.query.generic.parser.GenericQueryParser method) (pybool_ir.query.GenericQueryParser method) (pybool_ir.query.parser.QueryParser method) (pybool_ir.query.pubmed.parser.PubmedQueryParser method) (pybool_ir.query.PubmedQueryParser method) parse_clef_tar_topic() (in module pybool_ir.experiments.collections) parse_documents() (pybool_ir.index.generic.GenericSearcher method) (pybool_ir.index.generic.JsonldIndexer method) (pybool_ir.index.generic.JsonlIndexer method) (pybool_ir.index.index.Indexer method) (pybool_ir.index.Indexer method) (pybool_ir.index.ir_datasets.IRDatasetsIndexer method) (pybool_ir.index.pubmed.PubmedIndexer method) parse_lucene() (pybool_ir.query.generic.parser.GenericQueryParser method) (pybool_ir.query.GenericQueryParser method) (pybool_ir.query.parser.QueryParser method) (pybool_ir.query.pubmed.parser.PubmedQueryParser method) (pybool_ir.query.PubmedQueryParser method) parse_medline_date() (in module pybool_ir.index.pubmed) parse_pubmed_article_node() (in module pybool_ir.index.pubmed) Phrase (class in pybool_ir.query.dsl) PrecomputedQueryExperiment (class in pybool_ir.experiments.smooth) PredictorQueryExperiment (class in pybool_ir.experiments.smooth) process_document() (pybool_ir.index.generic.GenericSearcher method) (pybool_ir.index.generic.JsonlIndexer method) (pybool_ir.index.index.Indexer method) (pybool_ir.index.Indexer method) (pybool_ir.index.ir_datasets.IRDatasetsIndexer method) (pybool_ir.index.pubmed.PubmedIndexer method) ProgressFile (class in pybool_ir.util) PubmedArticle (class in pybool_ir.index.pubmed) PubmedIndexer (class in pybool_ir.index.pubmed) PubmedQueryParser (class in pybool_ir.query) (class in pybool_ir.query.pubmed.parser) pybool_ir module pybool_ir.cli module pybool_ir.datasets module pybool_ir.datasets.csur module pybool_ir.datasets.csur.parser module pybool_ir.datasets.pubmed module pybool_ir.datasets.pubmed.baseline module pybool_ir.datasets.pubmed.datautils module pybool_ir.datasets.pubmed.mesh module

pybool_ir.datasets.pubmed.pmc module pybool_ir.experiments module pybool_ir.experiments.collections module pybool_ir.experiments.decompose module pybool_ir.experiments.retrieval module pybool_ir.experiments.smooth module pybool_ir.index module pybool_ir.index.document module pybool_ir.index.generic module pybool_ir.index.index module pybool_ir.index.ir_datasets module pybool_ir.index.pubmed module pybool_ir.ml module pybool_ir.query module pybool_ir.query.ast module pybool_ir.query.dsl module pybool_ir.query.generic module pybool_ir.query.generic.parser module pybool_ir.query.ovid module pybool_ir.query.parser module pybool_ir.query.pubmed module pybool_ir.query.pubmed.fields module pybool_ir.query.pubmed.parser module pybool_ir.query.units module pybool_ir.util module

Q

queries (pybool_ir.experiments.decompose.DecomposeRetrievalExperiment property) query (pybool_ir.query.ast.AtomNode attribute) (pybool_ir.query.units.QueryAtom property) (pybool_ir.query.units.UnitAtom property)

QueryAtom (class in pybool_ir.query.units) QueryExperiment (class in pybool_ir.experiments.smooth) QueryObject (class in pybool_ir.query.dsl) QueryParser (class in pybool_ir.query.parser) QueryVisitor (class in pybool_ir.query.dsl)

R

raw_query (pybool_ir.query.units.QueryAtom property) (pybool_ir.query.units.UnitAtom property) read() (pybool_ir.util.ProgressFile method)

read_file() (pybool_ir.index.pubmed.PubmedIndexer static method) read_folder() (pybool_ir.index.pubmed.PubmedIndexer static method) read_jsonl() (pybool_ir.index.pubmed.PubmedIndexer static method) RetrievalExperiment (class in pybool_ir.experiments.retrieval)

S

search() (pybool_ir.index.generic.GenericSearcher method) (pybool_ir.index.index.SearcherMixin method) (pybool_ir.index.pubmed.PubmedIndexer method) search_fmt() (pybool_ir.index.generic.GenericSearcher method) (pybool_ir.index.index.SearcherMixin method) (pybool_ir.index.pubmed.PubmedIndexer method) SearcherMixin (class in pybool_ir.index.index) set_index_fields() (pybool_ir.index.generic.GenericSearcher method) (pybool_ir.index.generic.JsonlIndexer method) (pybool_ir.index.index.Indexer method) (pybool_ir.index.Indexer method) (pybool_ir.index.ir_datasets.IRDatasetsIndexer method) (pybool_ir.index.pubmed.PubmedIndexer method)

SmoothAND (class in pybool_ir.experiments.smooth) SmoothANDPredictor (class in pybool_ir.experiments.smooth) SmoothNOT (class in pybool_ir.experiments.smooth) SmoothNOTPredictor (class in pybool_ir.experiments.smooth) SmoothOperator (class in pybool_ir.experiments.smooth) SmoothOperatorPredictorMixin (class in pybool_ir.experiments.smooth) SmoothOR (class in pybool_ir.experiments.smooth) SmoothORPredictor (class in pybool_ir.experiments.smooth) Study (class in pybool_ir.datasets.csur.parser) StudyCharacteristics (class in pybool_ir.datasets.csur.parser)

T

Term (class in pybool_ir.query.dsl)

Topic (class in pybool_ir.experiments.collections) transform() (pybool_ir.query.parser.QueryParser method)

U

UnitAtom (class in pybool_ir.query.units)

W

write() (pybool_ir.util.ProgressFile method)